The viroid and viroid-like RNA database
نویسندگان
چکیده
منابع مشابه
The viroid and viroid-like RNA database
The viroid and viroid-like RNA database is a compilation of all natural sequences published in journals or available from the GenBank and EMBL nucleotide sequence libraries. Several information regarding these RNA species such as the position of their self-catalytic domains and the open reading frame of the human hepatitits delta virus are provided. The database also includes a determination of...
متن کاملUpdate of the viroid and viroid-like sequence database: addition of a hepatitis delta virus RNA section
Recently, we developed and made available an online database that includes all the reported (to our knowledge) viroid and viroid-like RNA sequences [Bussire,F., Lafontaine,D. and Perreault,J.-P. (1996)Nucleic Acids Res.24, 1793-1798]. We report here an update of this catalogue which includes the addition of a new section devoted to human hepatitis delta virus (vHDV) sequences. This new section ...
متن کاملThe database of the smallest known auto-replicable RNA species: viroids and viroid-like RNAs
This is an online database in order to facilitate research on viroid, viroid-like RNAs and human hepatitis delta virus by presenting a large number of sequences and related data in a comprehensive and user-friendly format (e.g., position of their self-catalytic domains, open reading frame, prediction of the most stable secondary structures, etc.). This online database is available on the WWW at...
متن کاملogenicity, viroid evolution, Citrus exocortis viroid, Potato spindle tuber viroid, Peach latent mosaic viroid, Chrysan- themum chlorotic mottle viroid
Viroids are autonomously replicating, small singlestranded circular RNA molecules that do not code for proteins and may cause disease in infected, susceptible plants. Viroids have the ability to induce both RNA-mediated transcriptional gene silencing (TGS) and posttranscriptional gene silencing (PTGS) in infected plants. Viroid PTGS has also been demonstrated in a wheat germ extract system. A p...
متن کاملRna Intermediates of Viroid Replication 329
Molecular hybridization by the Northern blot technique in combina t ion with 12SI-labeled PSTV (+) RNA and S2P-labeled PSTV cDNA as probes has been applied to d e t e c t v i r o i d s p e c i f i c s e q u e n c e s in h e a l t h y and v i r o i d ( P S T V ) i n f e c t e d t o m a t o plants . Conditions are described which allow d i f f e r e n t i a t i o n of (+) and (-) viroid sequences...
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ژورنال
عنوان ژورنال: Nucleic Acids Research
سال: 1999
ISSN: 0305-1048,1362-4962
DOI: 10.1093/nar/27.1.186